Bioconductor Project Working Papers

Most Popular Papers*

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Statistical Analyses and Reproducible Research
Robert Gentleman and Duncan Temple Lang

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Bioconductor: Open software development for computational biology and bioinformatics
Robert C. Gentleman, Vincent J. Carey, Douglas J. Bates, Benjamin M. Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J. Rossini, Guenther Sawitzki, Colin Smith, Gordon K. Smyth, Luke Tierney, Yee Hwa Yang, and Jianhua Zhang

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Visualizing Genomic Data
Robert Gentleman, Florian Hahne, and Wolfgang Huber

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Data Quality Assessment of Ungated Flow Cytometry Data in High
Nolwenn Le Meur, Anthony Rossini, Maura Gasparetto, Clay Smith, Ryan R. Brinkman, and Robert Gentleman

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An introduction to low-level analysis methods of DNA microarray data
Wolfgang Huber, Anja von Heydebreck, and Martin Vingron

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Differential Expression with the Bioconductor Project
Anja von Heydebreck, Wolfgang Huber, and Robert Gentleman

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Extensions to Gene Set Enrichment
Zhen Jiang and Robert Gentleman

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On the Synthesis of Microarray Experiments
Robert Gentleman, Markus Ruschhaupt, and Wolfgang Huber

* Based on the average number of full-text downloads per day since the paper was posted.