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Collection of Biostatistics Research Archive

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    Content Posted in 2012

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    A Cautionary Note on Specification of the Correlation Structure in Inverse-Probability-Weighted Estimation for Repeated Measures, Eric J. Tchetgen Tchetgen, M. Maria Glymour, Jennifer Weuve, and James Robins

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    A Comparison of Methods for Generating Correlated Binary Variates with Specified Marginal Means and Correlations, John S. Preisser Jr. and Bahjat F. Qaqish

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    Adaptive Matching in Randomized Trials and Observational Studies, Mark J. van der Laan, Laura Balzer, and Maya L. Petersen

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    A Multistage Non‐inferiority Study Analysis Plan to Evaluate Successively More Stringent Criteria for a Clinical Trial with Rare Events, Siying Li, Gary G. Koch, and Todd A. Schwartz DrPH

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    Analysis of Periodontal Data using Circular Statistics, Samopriyo Maitra and Thomas M. Braun

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    ANALYTIC PROGRAMMING WITH fMRI DATA: A QUICK-START GUIDE FOR STATISTICIANS USING R, Ani Eloyan, Shanshan Li, John Muschelli, Jim Pekar, Stewart Mostofsky, and Brian S. Caffo

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    A National Model Built with Partial Least Squares and Universal Kriging and Bootstrap-based Measurement Error Correction Techniques: An Application to the Multi-Ethnic Study of Atherosclerosis, Silas Bergen, Lianne Sheppard, Paul D. Sampson, Sun-Young Kim, Mark Richards, Sverre Vedal, Joel Kaufman, and Adam A. Szpiro

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    A Phase I Bayesian Adaptive Design to Simultaneously Optimize Dose and Schedule Assignments Both Among and Within Patients, Thomas M. Braun and Jin Zhang

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    A prior-free framework of coherent inference and its derivation of simple shrinkage estimators, David R. Bickel

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    A Regionalized National Universal Kriging Model Using Partial Least Squares Regression for Estimating Annual PM2.5 Concentrations in Epidemiology, Paul D. Sampson, Mark Richards, Adam A. Szpiro, Silas Bergen, Lianne Sheppard, Timothy V. Larson, and Joel Kaufman

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    Assessing the Causal Effect of Policies: An Approach Based on Stochastic Interventions, Iván Díaz and Mark J. van der Laan

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    A Systematic Selection Method for the Development of Cancer Staging Systems, Yunzhi Lin, Richard Chappell, and Mithat Gonen

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    AUTOMATED DIAGNOSES OF ATTENTION DEFICIT HYPERACTIVE DISORDER USING MAGNETIC RESONANCE IMAGING, Ani Eloyan, John Muschelli, Mary Beth Nebel, Han Liu, Fang Han, Tuo Zhao, Anita Barber, Suresh Joel, James J. Pekar, Stewart Mostofsky, and Brian Caffo

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    C2BAT: A Novel Method for Association Between Ge- netic Markers and Multiple Phenotypes, Melissa Naylor and Christoph Lange

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    Causal Inference for Networks, Mark J. van der Laan

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    Causal Mediation in a Survival Setting with Time-Dependent Mediators, Wenjing Zheng and Mark J. van der Laan

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    Change-Point Models to Estimate the Limit of Detection, Ryan C. May, Haitao Chu, Joseph G. Ibrahim, Michael G. Hudgens, Abigail C. Lees, and David M. Margolis

     

    Component extraction of Complex Biomedical signal and performance analysis based on different algorithm, hemant pasusangai kasturiwale

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    Computationally Efficient Confidence Intervals for Cross-validated Area Under the ROC Curve Estimates, Erin LeDell, Maya L. Petersen, and Mark J. van der Laan

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    CONFIDENCE INTERVALS FOR THE SELECTED POPULATION IN RANDOMIZED TRIALS THAT ADAPT THE POPULATION ENROLLED, Michael Rosenblum

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    Decline in Health for Older Adults: 5-Year Change in 13 Key Measures of Standardized Health, Paula H. Diehr, Stephen M. Thielke, Anne B. Newman, Calvin H. Hirsch, and Russell Tracy

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    Developing Adaptive Personalized Therapy for Cystic Fibrosis using Reinforcement Learning, Yiyun Tang and Michael R. Kosorok

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    Differential Patterns of Interaction and Gaussian Graphical Models, Masanao Yajima, Donatello Telesca, Yuan Ji, and Peter Muller

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    Empirical Pathway Analysis, without Permutation, Yi-Hui Zhou, William T. Barry, and Fred A. Wright

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    Estimating HIV prevalence in the presence of spatial variation, Matthew D. Austin, Christopher D. Barr, and Victor DeGruttola

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    Fitting and Interpreting Continuous-Time Latent Markov Models for Panel Data, Jane M. Lange and Vladimir N. Minin

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    Flexible Covariate-adjusted Exact Tests for Randomized Studies, Alisa J. Stephens, Eric J. Tchetgen Tchetgen, and Victor De Gruttola

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    Formulae for Causal Mediation Analysis in an Odds Ratio Context Without a Normality Assumption for the Continuous Mediator, Eric J. Tchetgen Tchetgen

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    Hierarchical Rank Aggregation with Applications to Nanotoxicology, Trina Patel, Donatello Telesca, Robert Rallo, Saji George, Xia Tian, and Nel Andre

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    Identification of biologically relevant subtypes via preweighted sparse clustering, Sheila Gaynor and Eric Bair

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    Inverse Odds Ratio-Weighted Estimation for Causal Mediation Analysis, Eric J. Tchetgen Tchetgen

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    LIKELIHOOD RATIO TESTS FOR THE MEAN STRUCTURE OF CORRELATED FUNCTIONAL PROCESSES, Ana-Maria Staicu, Yingxing Li, Ciprian Crainiceanu, and David M. Ruppert

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    Locally Efficient Estimation of Marginal Treatment Effects when Outcomes are Correlated: Is the Prize Worth the Chase?, Alisa J. Stephens, Eric J. Tchetgen Tchetgen, and Victor De Gruttola

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    LONGITUDINAL FUNCTIONAL MODELS WITH STRUCTURED PENALTIES, Madan G. Kundu, Jaroslaw Harezlak, and Timothy W. Randolph

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    Methods for Evaluating Prediction Performance of Biomarkers and Tests, Margaret Pepe and Holly Janes

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    Model Averaged Double Robust Estimation, Matthew Cefalu, Francesca Dominici, and Giovanni Parmigiani

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    MODELING SLEEP FRAGMENTATION IN POPULATIONS OF SLEEP HYPNOGRAMS, Bruce J. Swihart, Naresh M. Punjabi, and Ciprian M. Crainiceanu

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    Multiple-Robust Estimation of an Odds Ratio Interaction, Eric J. Tchetgen Tchetgen

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    Nonparametric Inference for Meta Analysis with Fixed Unknown, Study-specific Parameters, Brian Claggett, Minge Xie, and Lu Tian

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    On a Closed-form Doubly Robust Estimator of the Adjusted Odds Ratio for a Binary Exposure, Eric J. Tchetgen Tchetgen

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    On a Logistic Mixed Model Formulation of a Quadratic Exponential Model for Correlated Binary Outcomes, Eric J. Tchetgen Tchetgen

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    On Identification of Natural Direct Effects when a Confounder of the Mediator is Directly Affected by Exposure, Eric J. Tchetgen Tchetgen and Tyler J. VanderWeele

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    On Identification of Natural Direct Effects when a Confounder of the Mediator is Directly Affected by Exposure, Eric J. Tchetgen Tchetgen and Tyler J. VanderWeele

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    On Parametrization, Robustness and Sensitivity Analysis in a Marginal Structural Cox Proportional Hazards Model for Point Exposure, Eric J. Tchetgen Tchetgen and James M. Robins

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    Optimal Spatial Prediction Using Ensemble Machine Learning, Molly M. Davies and Mark J. van der Laan

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    PLS-ROG: Partial least squares with rank order of groups, Hiroyuki Yamamoto

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    Proxy Pattern-Mixture Analysis for a Binary Variable Subject to Nonresponse., Rebecca H. Andridge and Roderick J. Little

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    Quantifying alternative splicing from paired-end RNA-sequencing data, David Rossell, Camille Stephan-Otto Attolini, Manuel Kroiss, and Almond Stöcker

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    Reader Reaction: On Variance Estimation for the Fine-Gray Model, Chenxi Li, Robert J. Gray, and Jason P. Fine

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    Relating Nanoparticle Properties to Biological Outcomes in Exposure Escalation Experiments, Trina Patel, Cecile Low-Kam, Zhaoxia Ji, Haiyuan Zhang, Tian Xia, Andre E. Nel, Jeffrey I. Zinc, and Donatello Telesca

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    Research Methods for Clinical Trials in Personalized Medicine: A Systematic Review, Zheng Ren, Marie Davidian, Stephen L. George, Richard M. Goldberg, Fred A. Wright, Anastasios A. Tsiatis, and Michael R. Kosorok

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    RESTRICTED LIKELIHOOD RATIO TESTS FOR FUNCTIONAL EFFECTS IN THE FUNCTIONAL LINEAR MODEL, Bruce J. Swihart, Jeff Goldsmith, and Ciprian M. Crainiceanu

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    Robust Estimation of Pure/Natural Direct Effects with Mediator Measurement Error, Eric J. Tchetgen Tchetgen and Sheng Hsuan Lin

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    Robust Estimation of Pure/Natural Direct Effects with Mediator Measurement Error, Eric J. Tchetgen Tchetgen and Sheng Hsuan Lin

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    Robustness of Measures of Interaction to Unmeasured Confounding, Eric J. Tchetgen Tchetgen and Tyler J. VanderWeele

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    Robustness of Measures of Interaction to Unmeasured Confounding, Eric J. Tchetgen Tchetgen and Tyler J. VanderWeele

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    Sensitivity Analysis for Causal Inference Under Unmeasured Confounding and Measurement Error Problems, Iván Díaz and Mark J. van der Laan

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    Simple and accurate trend tests using a permutation approximation, Yi-Hui Zhou and Fred A. Wright

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    Sparse Integrative Clustering of Multiple Omics Data Sets, Ronglai Shen, Sijian Wang, and Qianxing Mo

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    Statistical hypothesis test of factor loading in principal component analysis and its application to metabolite set enrichment analysis, Hiroyuki Yamamoto, Tamaki Fujimori, Hajime Sato, Gen Ishikawa, Kenjiro Kami, and Yoshiaki Ohashi

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    Statistical Inference when using Data Adaptive Estimators of Nuisance Parameters, Mark J. van der Laan

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    Subsample ignorable likelihood for accelerated failure time models with missing predictors, Nanhua Zhang and Roderick J. Little

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    Targeted Learning for Causality and Statistical Analysis in Medical Research, Sherri Rose, Richard J.C.M. Starmans, and Mark J. van der Laan

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    Targeted Learning of The Probability of Success of An In Vitro Fertilization Program Controlling for Time-dependent Confounders, Antoine Chambaz, Sherri Rose, Jean Bouyer, and Mark J. van der Laan

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    The Bayesian Continual Reassessment Method Using a Mixture-of-Uniforms Prior, Thomas M. Braun

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    The Impact of Covariance Misspecification in Multivariate Gaussian Mixtures on Estimation and Inference: An Application to Longitudinal Modeling, Brianna C. Heggeseth and Nicholas P. Jewell

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    Toxicity Profiling of Engineered Nanomaterials via Multivariate Dose Response Surface Modeling, Trina Patel, Donatello Telesca, Saji George, and Andre Nel

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    Transitions Among Health States Using 12 Measures of Successful Aging: Results from the Cardiovascular Health Study, Stephen Thielke and Paula Diehr

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    Treatment Selections using Risk-benefit Profiles Based on Data from Comparative Randomized Clinical Trials with Multiple Endpoints, Brian Claggett, Lu Tian, Davide Castagno, and L. J. Wei

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    Why Match in Individually and Cluster Randomized Trials?, Laura B. Balzer, Maya L. Petersen, and Mark J. van der Laan

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    Why odds ratio estimates of GWAS are almost always close to 1.0, Yutaka Yasui

 
 
 

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